Genome-wide summary statistics used for the analysis described in 'Rare protein-altering variants in ANGPTL7 lower intraocular pressure and protect against glaucoma'
datasetposted on 14.12.2019 by Yosuke Tanigawa, Manuel Rivas
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
The dataset deposited here contains the genome-wide association summary statistics for 7 traits characterized in UK Biobank described in the following publication:
Y. Tanigawa, et al., Rare protein-altering variants in ANGPTL7 lower intraocular pressure and protect against glaucoma. PLOS Genetics. 16, e1008682 (2020).
The 7 traits included in the datasets are:
- INI5255: Goldmann-correlated IOP (right)
- INI5263: Goldmann-correlated IOP (left)
- INI2005255: Goldmann-correlated IOP (median)
- INI5254: corneal-compensated IOP (right)
- INI5262: corneal-compensated IOP (left)
- INI2005254: corneal-compensated IOP (median)
- HC276: Glaucoma
The data files are generated by PLINK 2.0 (https://www.cog-genomics.org/plink/2.0/) and provided as a gzip compressed tab-delimitated table format and its corresponding PLINK log files (text format). Please refer to the PLINK website for the column descriptors of the data files (https://www.cog-genomics.org/plink/2.0/formats#glm_linear and https://www.cog-genomics.org/plink/2.0/formats#glm_logistic).
Please read our paper for more information regarding this dataset.
SOFTWARE FOR LARGE-SCALE INFERENCE OF THE GENETICS OF LIFESTYLE MEASURES, BIOMARKERS, AND COMMON AND RARE DISEASES
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- HG - National Human Genome Research Institute (NHGRI)