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Collection Data and software/code repository for "Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus" (Kotliarov, Y., Sparks, R. et al. Nat. Med. DOI: https://doi.org/10.1038/s41591-020-0769-8(2020))
Yuri Kotliarov
2020-02-23T05:23:10Z
software
Singularity container to reproduce analyses in Figures 1-3 and Extended Figures 1-7 (development and testing of baseline predictive signatures)
Yuri Kotliarov
2020-02-23T05:20:41Z
software
Singularity container for CITE-seq data analysis
Yuri Kotliarov
2020-02-23T05:19:38Z
software
R code to reproduce the data analysis
Yuri Kotliarov
2020-02-23T05:19:09Z
dataset
Datasets to reproduce Figures 1-3 and associated Extended Data Figures
Yuri Kotliarov
2020-02-23T05:18:36Z
dataset
RNAseq data of CD20+CD38++ and other B cell subsets sorted from healthy donors
Andrew Martins
2020-02-23T05:18:07Z
dataset
B cell flow cytometry data (FlowJo + FCS files) from the NIH/CHI influenza vaccination study
Yuri Kotliarov
2020-02-23T05:17:03Z
dataset
CITE-seq protein-mRNA single cell data from high and low vaccine responders (to reproduce Figs 4-6 and associated Extended Data Figs)
Yuri Kotliarov
2020-02-23T05:16:32Z
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Supplemental Figure for "Mitochondrial 8-Oxoguanine DNA Glycosylase Mitigates Alveolar Epithelial Cell PINK1 Deficiency, Mitochondrial DNA damage, Apoptosis and Lung Fibrosis"
Seokjo Kim
2020-02-20T21:37:30Z
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Signaling through the interleukin-4 and interleukin-13 receptor complexes regulate cholangiocyte TMEM16A expression and biliary secretion - Supplemental figures and table
Kristy Boggs
2020-02-20T21:21:07Z