Computational Biology

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Dataset supporting: Normalizing and denoising protein expression data from droplet-based single cell profiling

dataset posted on 2021-12-05

Diffusion MRI data supporting "Tractography Processing with the Sparse Closest Point Transform"

dataset posted on 2020-06-08

collection:
Supplementary Materials for 25 Years of Pathway Figures

posted on 2020-06-05

OCR results from 65k pathway figures published between 1995 and 2019

dataset posted on 2020-06-05

65k pathway figures published between 1995 and 2019

dataset posted on 2020-06-05

Live-cell imaging data for DASC (disassembly asymmetry score classification) analysis of calthrin-mediated endocytosis

Live-cell imaging data for DASC (disassembly asymmetry score classification) analysis of calthrin-mediated endocytosis

dataset posted on 2020-04-28

collection:
Data and software/code repository for "Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus" (Kotliarov, Y., Sparks, R. et al. Nat. Med. DOI: https://doi.org/10.1038/s41591-020-0769-8(2020))

posted on 2020-02-23

Singularity container to reproduce analyses in Figures 1-3 and Extended Figures 1-7 (development and testing of baseline predictive signatures)

software posted on 2020-02-23

Singularity container for CITE-seq data analysis

software posted on 2020-02-23

R code to reproduce the data analysis

software posted on 2020-02-23

Datasets to reproduce Figures 1-3 and associated Extended Data Figures

dataset posted on 2020-02-23

RNAseq data of CD20+CD38++ and other B cell subsets sorted from healthy donors

dataset posted on 2020-02-23

CITE-seq protein-mRNA single cell data from high and low vaccine responders (to reproduce Figs 4-6 and associated Extended Data Figs)

dataset posted on 2020-02-23

Sequencing result of a mixture of synthesized DNA barcodes

dataset posted on 2019-12-19

ImmClassifier training datasets for machine learning

dataset posted on 2019-12-07